dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01588
Location and strand information: 1894715 - 1897294 (+)
Family: 1.B.42.1.8
Protein type: TC
Protein description: LPS-assembly protein LptD

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01589
Location and strand information: 1897737 - 1898525 (-)
Family: null
Protein type: null
Protein description: Putative TrmH family tRNA/rRNA methyltransferase

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01590
Location and strand information: 1898564 - 1900519 (-)
Family: 3.A.1.121.4
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YheS

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01591
Location and strand information: 1900722 - 1902353 (+)
Family: null
Protein type: null
Protein description: 1-pyrroline-5-carboxylate dehydrogenase 2

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01592
Location and strand information: 1902546 - 1905068 (+)
Family: GH84
Protein type: CAZyme
Protein description: O-GlcNAcase
Protein isoelectric point: 7.0322
Protein molecular weight: 95839.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01593
Location and strand information: 1905286 - 1906596 (+)
Family: null
Protein type: null
Protein description: 5'-deoxyadenosine deaminase

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01594
Location and strand information: 1906688 - 1907803 (-)
Family: PL0|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.237
Protein molecular weight: 42918.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01595
Location and strand information: 1907825 - 1909234 (-)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1521
Protein molecular weight: 54121.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001399_1|CGC19
Gene ID: MGYG000001399_01596
Location and strand information: 1909249 - 1911363 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 7.6674
Protein molecular weight: 81986.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001399_01588	LPS-assembly protein LptD	TC	1894715	1897294	+	1.B.42.1.8
MGYG000001399_01589	Putative TrmH family tRNA/rRNA methyltransferase	null	1897737	1898525	-	SpoU_sub_bind\| SpoU_methylase
MGYG000001399_01590	putative ABC transporter ATP-binding protein YheS	TC	1898564	1900519	-	3.A.1.121.4
MGYG000001399_01591	1-pyrroline-5-carboxylate dehydrogenase 2	null	1900722	1902353	+	Aldedh
MGYG000001399_01592	O-GlcNAcase	CAZyme	1902546	1905068	+	GH84
MGYG000001399_01593	5'-deoxyadenosine deaminase	null	1905286	1906596	+	Amidohydro_1
MGYG000001399_01594	hypothetical protein	CAZyme	1906688	1907803	-	PL0\| GH105
MGYG000001399_01595	hypothetical protein	CAZyme	1907825	1909234	-	GH29
MGYG000001399_01596	Beta-galactosidase BoGH2A	CAZyme	1909249	1911363	-	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature